AT5G67580

Description : Homeodomain-like/winged-helix DNA-binding family protein

Gene families : OG_01_0000921 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000921_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G67580
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp3g05000.1	No alias	PRC2-recruiting factor (TRB). transcription factor (MYB-related)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003691	double-stranded telomeric DNA binding	IDA	Interproscan
MF	GO:0003697	single-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0042162	telomeric DNA binding	IDA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IPI	Interproscan
MF	GO:0043047	single-stranded telomeric DNA binding	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
MF	GO:0098847	sequence-specific single stranded DNA binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000578	embryonic axis specification	IEP	HCCA
BP	GO:0002229	defense response to oomycetes	IEP	HCCA
BP	GO:0002239	response to oomycetes	IEP	HCCA
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0004143	diacylglycerol kinase activity	IEP	HCCA
MF	GO:0004930	G protein-coupled receptor activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	HCCA
CC	GO:0005876	spindle microtubule	IEP	HCCA
CC	GO:0005885	Arp2/3 protein complex	IEP	HCCA
BP	GO:0006089	lactate metabolic process	IEP	HCCA
BP	GO:0006278	RNA-dependent DNA biosynthetic process	IEP	HCCA
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	HCCA
BP	GO:0006626	protein targeting to mitochondrion	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0008020	G protein-coupled photoreceptor activity	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
BP	GO:0009301	snRNA transcription	IEP	HCCA
BP	GO:0009438	methylglyoxal metabolic process	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
MF	GO:0009881	photoreceptor activity	IEP	HCCA
MF	GO:0009883	red or far-red light photoreceptor activity	IEP	HCCA
BP	GO:0009942	longitudinal axis specification	IEP	HCCA
BP	GO:0009945	radial axis specification	IEP	HCCA
BP	GO:0016578	histone deubiquitination	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	HCCA
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
MF	GO:0031491	nucleosome binding	IEP	HCCA
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	HCCA
BP	GO:0034635	glutathione transport	IEP	HCCA
MF	GO:0035250	UDP-galactosyltransferase activity	IEP	HCCA
BP	GO:0042182	ketone catabolic process	IEP	HCCA
BP	GO:0042939	tripeptide transport	IEP	HCCA
BP	GO:0043696	dedifferentiation	IEP	HCCA
BP	GO:0043697	cell dedifferentiation	IEP	HCCA
BP	GO:0045003	double-strand break repair via synthesis-dependent strand annealing	IEP	HCCA
BP	GO:0046185	aldehyde catabolic process	IEP	HCCA
MF	GO:0046481	digalactosyldiacylglycerol synthase activity	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0051011	microtubule minus-end binding	IEP	HCCA
BP	GO:0051596	methylglyoxal catabolic process	IEP	HCCA
BP	GO:0060184	cell cycle switching	IEP	HCCA
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	HCCA
BP	GO:0070585	protein localization to mitochondrion	IEP	HCCA
BP	GO:0071365	cellular response to auxin stimulus	IEP	HCCA
BP	GO:0071368	cellular response to cytokinin stimulus	IEP	HCCA
BP	GO:0071897	DNA biosynthetic process	IEP	HCCA
BP	GO:0071985	multivesicular body sorting pathway	IEP	HCCA
BP	GO:0072337	modified amino acid transport	IEP	HCCA
BP	GO:0072348	sulfur compound transport	IEP	HCCA
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	HCCA
BP	GO:0098781	ncRNA transcription	IEP	HCCA
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005818	Histone_H1/H5_H15	124	182
IPR001005	SANT/Myb	5	55

External Links

PLAZA 3.0 Dicots	AT5G67580

AT5G67580

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation