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  5. AT1G27580

AT1G27580


Description : Protein of unknown function (DUF295)


Gene families : OG_01_0000101 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G27580
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT1G10110 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67160 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04840 No alias Protein of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05970 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G33200 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03726 No alias Protein of unknown function (DUF295) 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03730 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22345 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10820 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12810 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12820 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14165 No alias F-box family protein-related 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22060 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22660 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G14160 No alias F-box family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G25290 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G25300 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G66830 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000104 succinate dehydrogenase activity IEP HCCA
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP HCCA
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0045281 succinate dehydrogenase complex IEP HCCA
CC GO:0045283 fumarate reductase complex IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005174 DUF295 286 339
PLAZA 3.0 Dicots AT1G27580