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  5. Cre01.g026600

Cre01.g026600


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein


Gene families : OG_01_0003219 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g026600
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT1G78870 No alias ubiquitin-conjugating enzyme 35 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g05230.1 No alias ubiquitin-conjugating E2 protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_22530V3.1 No alias ubiquitin-conjugating enzyme 36 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 15 150
No external refs found!