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  5. Cre01.g034650

Cre01.g034650


No description available


Gene families : OG_01_0006085 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre01.g034650
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G06590 No alias unknown protein; Has 380 Blast hits to 268 proteins in... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g02010.1 No alias component APC5 of (APC/C)-dependent ubiquitination... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR026000 Apc5_dom 267 356
No external refs found!