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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS19 component
Gene families : OG_01_0001363 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001363_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre02.g106600 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G02080 | No alias | Ribosomal protein S19e family protein | 0.28 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G15520 | No alias | Ribosomal protein S19e family protein | 0.17 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G61170 | No alias | Ribosomal protein S19e family protein | 0.51 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp1g27380.1 | No alias | component RPS19 of SSU proteome | 0.49 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c14_19640V3.1 | No alias | Ribosomal protein S19e family protein | 0.53 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c17_15200V3.1 | No alias | Ribosomal protein S19e family protein | 0.24 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c1_28780V3.1 | No alias | Ribosomal protein S19e family protein | 0.43 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c27_2780V3.1 | No alias | Ribosomal protein S19e family protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c2_10060V3.1 | No alias | Ribosomal protein S19e family protein | 0.43 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_02763.1 | No alias | component eS19 of SSU proteome | 0.18 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001266 | Ribosomal_S19e | 8 | 143 |
| No external refs found! |