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  5. Cre03.g144907

Cre03.g144907


Description : Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor


Gene families : OG_01_0001536 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g144907
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Mp7g18640.1 No alias SWC4 recruitment factor of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_4040V3.1 No alias myb-like transcription factor family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR032563 DAMP1_SANT-like 117 201
No external refs found!