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AT1G30760


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000138 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30760
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT1G26390 No alias FAD-binding Berberine family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26410 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26420 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30700 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44440 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010432 bract development IEP HCCA
MF GO:0010436 carotenoid dioxygenase activity IEP HCCA
BP GO:0010451 floral meristem growth IEP HCCA
MF GO:0010487 thermospermine synthase activity IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016768 spermine synthase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048759 xylem vessel member cell differentiation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0080086 stamen filament development IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
BP GO:1905177 tracheary element differentiation IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR012951 BBE 477 530
IPR006094 Oxid_FAD_bind_N 84 222
PLAZA 3.0 Dicots AT1G30760