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  5. AT1G30930

AT1G30930


Description : F-box family protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30930
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G30925 No alias phospholipase Cs 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31080 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46840 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67130 No alias F-box family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23160 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G31470 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50220 No alias F-box family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 204 320
IPR001810 F-box_dom 4 41
PLAZA 3.0 Dicots AT1G30930