AT1G30950

Description : F-box family protein

Gene families : OG_01_0015435 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30950
Cluster	HCCA: Cluster_36

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IPI	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IMP	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IDA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008134	transcription factor binding	IPI	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009933	meristem structural organization	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IGI	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042752	regulation of circadian rhythm	RCA	Interproscan
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003756	protein disulfide isomerase activity	IEP	HCCA
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009934	regulation of meristem structural organization	IEP	HCCA
BP	GO:0009943	adaxial/abaxial axis specification	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0009947	centrolateral axis specification	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010022	meristem determinacy	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010076	maintenance of floral meristem identity	IEP	HCCA
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010094	specification of carpel identity	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010154	fruit development	IEP	HCCA
BP	GO:0010158	abaxial cell fate specification	IEP	HCCA
BP	GO:0010159	specification of animal organ position	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	HCCA
BP	GO:0010223	secondary shoot formation	IEP	HCCA
BP	GO:0010229	inflorescence development	IEP	HCCA
BP	GO:0010338	leaf formation	IEP	HCCA
BP	GO:0010346	shoot axis formation	IEP	HCCA
BP	GO:0010450	inflorescence meristem growth	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	HCCA
BP	GO:0010865	stipule development	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0016441	posttranscriptional gene silencing	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	HCCA
MF	GO:0019209	kinase activator activity	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
MF	GO:0031490	chromatin DNA binding	IEP	HCCA
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032504	multicellular organism reproduction	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0035265	organ growth	IEP	HCCA
BP	GO:0035266	meristem growth	IEP	HCCA
BP	GO:0040009	regulation of growth rate	IEP	HCCA
MF	GO:0043621	protein self-association	IEP	HCCA
BP	GO:0045165	cell fate commitment	IEP	HCCA
BP	GO:0045168	cell-cell signaling involved in cell fate commitment	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0046620	regulation of organ growth	IEP	HCCA
BP	GO:0046622	positive regulation of organ growth	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048448	stamen morphogenesis	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048455	stamen formation	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048513	animal organ development	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048639	positive regulation of developmental growth	IEP	HCCA
BP	GO:0048645	animal organ formation	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048859	formation of anatomical boundary	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0080006	internode patterning	IEP	HCCA
BP	GO:0090506	axillary shoot meristem initiation	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090691	formation of plant organ boundary	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	46	81

External Links

PLAZA 3.0 Dicots	AT1G30950

AT1G30950

Expression Profile

Co-expression Networks

Functional Annotation