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  5. Cre03.g172200

Cre03.g172200


No description available


Gene families : OG_01_0004487 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g172200
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Mp1g15200.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_2570V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 211 235
IPR001680 WD40_repeat 254 277
No external refs found!