AT1G31340

Description : related to ubiquitin 1

Gene families : OG_01_0002560 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002560_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G31340
Cluster	HCCA: Cluster_4

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006464	cellular protein modification process	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	IMP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0045116	protein neddylation	TAS	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
CC	GO:0000228	nuclear chromosome	IEP	HCCA
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
CC	GO:0000793	condensed chromosome	IEP	HCCA
CC	GO:0000794	condensed nuclear chromosome	IEP	HCCA
BP	GO:0000919	cell plate assembly	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004568	chitinase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005253	anion channel activity	IEP	HCCA
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	HCCA
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	HCCA
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	HCCA
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEP	HCCA
CC	GO:0005775	vacuolar lumen	IEP	HCCA
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006580	ethanolamine metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006617	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	ion transport	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0006820	anion transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0006885	regulation of pH	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008308	voltage-gated anion channel activity	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
MF	GO:0008320	protein transmembrane transporter activity	IEP	HCCA
MF	GO:0008728	GTP diphosphokinase activity	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009270	response to humidity	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009871	jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	IEP	HCCA
BP	GO:0009873	ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009970	cellular response to sulfate starvation	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010037	response to carbon dioxide	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010265	SCF complex assembly	IEP	HCCA
MF	GO:0010294	abscisic acid glucosyltransferase activity	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015075	ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0015298	solute:cation antiporter activity	IEP	HCCA
MF	GO:0015299	solute:proton antiporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015385	sodium:proton antiporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015450	protein-transporting ATPase activity	IEP	HCCA
MF	GO:0015491	cation:cation antiporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transport	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015804	neutral amino acid transport	IEP	HCCA
BP	GO:0015824	proline transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
BP	GO:0016926	protein desumoylation	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	HCCA
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	HCCA
BP	GO:0030007	cellular potassium ion homeostasis	IEP	HCCA
BP	GO:0030104	water homeostasis	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0032104	regulation of response to extracellular stimulus	IEP	HCCA
BP	GO:0032107	regulation of response to nutrient levels	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0034220	ion transmembrane transport	IEP	HCCA
BP	GO:0034308	primary alcohol metabolic process	IEP	HCCA
BP	GO:0034613	cellular protein localization	IEP	HCCA
BP	GO:0034614	cellular response to reactive oxygen species	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
BP	GO:0042439	ethanolamine-containing compound metabolic process	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0042762	regulation of sulfur metabolic process	IEP	HCCA
BP	GO:0042891	obsolete antibiotic transport	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0043620	regulation of DNA-templated transcription in response to stress	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048871	multicellular organismal homeostasis	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050878	regulation of body fluid levels	IEP	HCCA
BP	GO:0050891	multicellular organismal water homeostasis	IEP	HCCA
MF	GO:0051139	metal ion:proton antiporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
MF	GO:0052638	indole-3-butyrate beta-glucosyltransferase activity	IEP	HCCA
BP	GO:0055075	potassium ion homeostasis	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0070301	cellular response to hydrogen peroxide	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071474	cellular hyperosmotic response	IEP	HCCA
BP	GO:0071475	cellular hyperosmotic salinity response	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
MF	GO:0080002	UDP-glucose:4-aminobenzoate acylglucosyltransferase activity	IEP	HCCA
BP	GO:0080024	indolebutyric acid metabolic process	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0090332	stomatal closure	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:0097306	cellular response to alcohol	IEP	HCCA
BP	GO:0098655	cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	HCCA
MF	GO:0140318	protein transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901160	primary amino compound metabolic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	HCCA
BP	GO:1902456	regulation of stomatal opening	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin-like_dom	79	150
IPR000626	Ubiquitin-like_dom	3	74

External Links

PLAZA 3.0 Dicots	AT1G31340

AT1G31340

Expression Profile

Co-expression Networks

Functional Annotation