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AT1G31430


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_01_0016371 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31430
Cluster HCCA: Cluster_220


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009875 pollen-pistil interaction IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway IEP HCCA
BP GO:0019478 D-amino acid catabolic process IEP HCCA
BP GO:0032877 positive regulation of DNA endoreduplication IEP HCCA
MF GO:0034046 poly(G) binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
BP GO:0042401 cellular biogenic amine biosynthetic process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0045740 positive regulation of DNA replication IEP HCCA
BP GO:0046416 D-amino acid metabolic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048497 maintenance of floral organ identity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
MF GO:0070717 poly-purine tract binding IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090700 maintenance of plant organ identity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
BP GO:2000105 positive regulation of DNA-dependent DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 363 485
IPR002885 Pentatricopeptide_repeat 242 290
IPR002885 Pentatricopeptide_repeat 489 516
IPR002885 Pentatricopeptide_repeat 215 238
IPR002885 Pentatricopeptide_repeat 318 343
IPR002885 Pentatricopeptide_repeat 85 111
IPR002885 Pentatricopeptide_repeat 113 140
IPR002885 Pentatricopeptide_repeat 186 213
PLAZA 3.0 Dicots AT1G31430