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  5. Cre03.g186800

Cre03.g186800


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum


Gene families : OG_01_0000013 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre03.g186800

Target Alias Description ECC score Gene Family Method Actions
Cre03.g183950 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06148.1 No alias no annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07792.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 767 886
IPR013103 RVT_2 1321 1452
IPR013103 RVT_2 1183 1287
No external refs found!