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Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component
Gene families : OG_01_0000836 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000836_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre04.g213450 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c13_6090V3.1 | No alias | vacuolar protein sorting-associated protein 2.3 | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c13_8060V3.1 | No alias | SNF7 family protein | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c23_14890V3.1 | No alias | vacuolar protein sorting-associated protein 2.3 | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_01819.1 | No alias | component VPS2/CHMP2 of ESCRT-III complex | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007034 | vacuolar transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000813 | ESCRT I complex | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| CC | GO:0016021 | integral component of membrane | IEP | HCCA |
| BP | GO:0016197 | endosomal transport | IEP | HCCA |
| CC | GO:0031224 | intrinsic component of membrane | IEP | HCCA |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| CC | GO:0036452 | ESCRT complex | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005024 | Snf7_fam | 4 | 171 |
| No external refs found! |