1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre04.g214503

Cre04.g214503


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS12 component


Gene families : OG_01_0002710 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002710_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g214503
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT1G15930 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G32060 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g11470.1 No alias component RPS12 of SSU proteome 0.39 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_3210V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_7980V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.45 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_3630V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13892.1 No alias component eS12 of SSU proteome 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 26 119
No external refs found!