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  5. Cre04.g216850

Cre04.g216850


Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.alpha-Tubulin component


Gene families : OG_01_0000395 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre04.g216850
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT1G50010 No alias tubulin alpha-2 chain 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G19780 No alias tubulin alpha-5 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g24530.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g08430.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_1010V3.1 No alias tubulin alpha-5 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08159.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005261 cation channel activity IEP HCCA
MF GO:0005262 calcium channel activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
CC GO:0005929 cilium IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0031514 motile cilium IEP HCCA
BP GO:0040011 locomotion IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0048870 cell motility IEP HCCA
BP GO:0070588 calcium ion transmembrane transport IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
No external refs found!