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AT1G32415


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_01_0015212 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G32415
Cluster HCCA: Cluster_232


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0000966 RNA 5'-end processing IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0009378 four-way junction helicase activity IEP HCCA
MF GO:0036310 ATP-dependent DNA/DNA annealing activity IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
MF GO:0140666 annealing activity IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
MF GO:1990814 DNA/DNA annealing activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 430 474
IPR002885 Pentatricopeptide_repeat 136 169
IPR002885 Pentatricopeptide_repeat 261 301
IPR002885 Pentatricopeptide_repeat 532 580
IPR002885 Pentatricopeptide_repeat 230 258
IPR002885 Pentatricopeptide_repeat 608 628
IPR002885 Pentatricopeptide_repeat 80 108
IPR002885 Pentatricopeptide_repeat 370 396
IPR002885 Pentatricopeptide_repeat 401 429
IPR002885 Pentatricopeptide_repeat 170 199
PLAZA 3.0 Dicots AT1G32415