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Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor
Gene families : OG_01_0001414 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001414_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre05.g243000 | |
| Cluster | HCCA: Cluster_136 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c7_7640V3.1 | No alias | response regulator 2 | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_10020.1 | No alias | transcription factor (ARR-B) | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| BP | GO:0002949 | tRNA threonylcarbamoyladenosine modification | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| MF | GO:0005216 | ion channel activity | IEP | HCCA |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | HCCA |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
| MF | GO:0005253 | anion channel activity | IEP | HCCA |
| MF | GO:0005254 | chloride channel activity | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006811 | ion transport | IEP | HCCA |
| BP | GO:0006820 | anion transport | IEP | HCCA |
| BP | GO:0006821 | chloride transport | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | HCCA |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0070525 | tRNA threonylcarbamoyladenosine metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001789 | Sig_transdc_resp-reg_receiver | 29 | 136 |
| No external refs found! |