Cre06.g256420

Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component

Gene families : OG_01_0002736 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002736_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g256420
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c8_20180V3.1	No alias	Cyclin/Brf1-like TBP-binding protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
MF	GO:0017025	TBP-class protein binding	IEA	Interproscan
MF	GO:0140296	general transcription initiation factor binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003909	DNA ligase activity	IEP	HCCA
MF	GO:0003910	DNA ligase (ATP) activity	IEP	HCCA
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006817	phosphate ion transport	IEP	HCCA
BP	GO:0006820	anion transport	IEP	HCCA
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011665	BRF1_TBP-bd_dom	695	797
IPR013150	TFIIB_cyclin	195	268
IPR013150	TFIIB_cyclin	95	164

External Links

No external refs found!