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Description : RING/U-box superfamily protein
Gene families : OG_01_0005980 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005980_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G33480 | |
| Cluster | HCCA: Cluster_51 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000373 | Group II intron splicing | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | HCCA |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
| MF | GO:0004300 | enoyl-CoA hydratase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0004722 | protein serine/threonine phosphatase activity | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| CC | GO:0005778 | peroxisomal membrane | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008419 | RNA lariat debranching enzyme activity | IEP | HCCA |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
| BP | GO:0009648 | photoperiodism | IEP | HCCA |
| BP | GO:0009649 | entrainment of circadian clock | IEP | HCCA |
| MF | GO:0016289 | CoA hydrolase activity | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0016882 | cyclo-ligase activity | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| MF | GO:0030272 | 5-formyltetrahydrofolate cyclo-ligase activity | IEP | HCCA |
| CC | GO:0031903 | microbody membrane | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0043153 | entrainment of circadian clock by photoperiod | IEP | HCCA |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | HCCA |
| BP | GO:0048573 | photoperiodism, flowering | IEP | HCCA |
| BP | GO:0080175 | phragmoplast microtubule organization | IEP | HCCA |
| BP | GO:0097031 | obsolete mitochondrial respiratory chain complex I biogenesis | IEP | HCCA |
| BP | GO:0097034 | obsolete mitochondrial respiratory chain complex IV biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 99 | 142 |
| PLAZA 3.0 Dicots | AT1G33480 |