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  5. Cre06.g265500

Cre06.g265500


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG_01_0000031 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g265500
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G27360 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G10390 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G10400 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65360 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710550 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714650 No alias Chromatin organisation.histones.H3-type histone 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g09090.1 No alias histone (H3) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g10730.1 No alias histone (H3) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g16200.1 No alias histone (H3) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g18030.1 No alias histone (H3) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_14470V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_14481V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_20670V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_8680V3.1 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_11100V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03578.1 No alias histone (H3) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13653.1 No alias histone (H3) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 131
No external refs found!