Cre06.g269350

Description : Transcriptional repressor ILP1 OS=Arabidopsis thaliana

Gene families : OG_01_0002691 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002691_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g269350
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AT5G09210	No alias	GC-rich sequence DNA-binding factor-like protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g18770.1	No alias	component ILP1 of Intron-Lariat Spliceosome complex	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_20240V3.1	No alias	GC-rich sequence DNA-binding factor-like protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000339	RNA cap binding	IEP	HCCA
MF	GO:0000340	RNA 7-methylguanosine cap binding	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022783	GCFC_dom	719	763

External Links

No external refs found!