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  5. Cre06.g274000

Cre06.g274000


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG_01_0000031 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g274000
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G19890 No alias male-gamete-specific histone H3 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G27360 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G40040 No alias Histone superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G10390 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G10400 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65360 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714650 No alias Chromatin organisation.histones.H3-type histone 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g09090.1 No alias histone (H3) 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g10730.1 No alias histone (H3) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g16200.1 No alias histone (H3) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g18030.1 No alias histone (H3) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_12300V3.1 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_14470V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_14481V3.1 No alias Histone superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_20670V3.1 No alias Histone superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_8550V3.1 No alias Histone superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_8680V3.1 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_11100V3.1 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03578.1 No alias histone (H3) 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13653.1 No alias histone (H3) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 131
No external refs found!