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  5. Cre06.g278224

Cre06.g278224


Description : 60S ribosomal protein L16, mitochondrial OS=Prototheca wickerhamii


Gene families : OG_01_0001605 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g278224
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
ATCG00790 No alias ribosomal protein L16 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22400.1 No alias 60S ribosomal protein L16, mitochondrial OS=Marchantia... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_23477V3.1 No alias ribosomal protein L16 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_10761.1 No alias component uL14c of large ribosomal subunit proteome 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005763 mitochondrial small ribosomal subunit IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 151 267
No external refs found!