Cre06.g282000

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIII-type starch synthase

Gene families : OG_01_0006250 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006250_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre06.g282000
Cluster	HCCA: Cluster_157

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G11720	No alias	starch synthase 3	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0030247	polysaccharide binding	None	Extended
MF	GO:2001070	starch binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001296	Glyco_trans_1	1048	1165
IPR005085	CBM25	530	622
IPR005085	CBM25	699	785
IPR005085	CBM25	347	435
IPR013534	Starch_synth_cat_dom	797	985

External Links

No external refs found!