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  5. Cre06.g298650

Cre06.g298650


Description : Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor


Gene families : OG_01_0002662 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g298650
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Mp2g02760.1 No alias mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_28210V3.1 No alias eukaryotic translation initiation factor 4A1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_1080V3.1 No alias eukaryotic translation initiation factor 4A1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s93_30V3.1 No alias eukaryotic translation initiation factor 4A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06483.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 116 277
IPR001650 Helicase_C 317 425
No external refs found!