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  5. Cre07.g325700

Cre07.g325700


Description : ATP-dependent helicase BRM OS=Arabidopsis thaliana


Gene families : OG_01_0005259 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g325700
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT2G46020 No alias transcription regulatory protein SNF2, putative 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g17010.1 No alias chromatin remodeling factor (Snf2) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_14440V3.1 No alias transcription regulatory protein SNF2, putative 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11788.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 926 1000
No external refs found!