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  5. Cre07.g339050

Cre07.g339050


Description : Cytoskeleton.microfilament network.actin polymerisation.cofilin-like actin depolymerizing factor


Gene families : OG_01_0000446 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre07.g339050
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT4G25590 No alias actin depolymerizing factor 7 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52360 No alias actin depolymerizing factor 10 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047750 cholestenol delta-isomerase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 180 304
No external refs found!