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  5. Cre07.g357850

Cre07.g357850


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL22 component


Gene families : OG_01_0000811 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cre07.g357850
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT3G05560 No alias Ribosomal L22e protein family 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G27770 No alias Ribosomal L22e protein family 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.41 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_630V3.1 No alias Ribosomal L22e protein family 0.36 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_680V3.1 No alias Ribosomal L22e protein family 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_17710V3.1 No alias Ribosomal L22e protein family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_120V3.1 No alias Ribosomal L22e protein family 0.42 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_28500V3.1 No alias Ribosomal L22e protein family 0.47 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_28510V3.1 No alias Ribosomal L22e protein family 0.47 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_5370V3.1 No alias Ribosomal L22e protein family 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_27030V3.1 No alias Ribosomal L22e protein family 0.28 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00776.1 No alias component eL22 of LSU proteome component 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 16 125
No external refs found!