AT1G04450

Description : ROP-interactive CRIB motif-containing protein 3

Gene families : OG_01_0001061 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G04450
Cluster	HCCA: Cluster_60

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006874	cellular calcium ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0007204	positive regulation of cytosolic calcium ion concentration	IMP	Interproscan
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IMP	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0017157	regulation of exocytosis	IDA	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030834	regulation of actin filament depolymerization	IMP	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050848	regulation of calcium-mediated signaling	IMP	Interproscan
BP	GO:0050850	positive regulation of calcium-mediated signaling	IMP	Interproscan
BP	GO:0051046	regulation of secretion	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051480	regulation of cytosolic calcium ion concentration	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051648	vesicle localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051650	establishment of vesicle localization	IDA	Interproscan
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055074	calcium ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072503	cellular divalent inorganic cation homeostasis	None	Extended
BP	GO:0072507	divalent inorganic cation homeostasis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901879	regulation of protein depolymerization	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902533	positive regulation of intracellular signal transduction	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1903530	regulation of secretion by cell	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003785	actin monomer binding	IEP	HCCA
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	ion channel activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
CC	GO:0005884	actin filament	IEP	HCCA
CC	GO:0005938	cell cortex	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006828	manganese ion transport	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	HCCA
BP	GO:0009306	protein secretion	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009865	pollen tube adhesion	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
MF	GO:0015075	ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
CC	GO:0015629	actin cytoskeleton	IEP	HCCA
BP	GO:0015691	cadmium ion transport	IEP	HCCA
MF	GO:0016004	phospholipase activator activity	IEP	HCCA
CC	GO:0016324	apical plasma membrane	IEP	HCCA
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030036	actin cytoskeleton organization	IEP	HCCA
CC	GO:0030133	transport vesicle	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
CC	GO:0030427	site of polarized growth	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0035023	regulation of Rho protein signal transduction	IEP	HCCA
BP	GO:0035024	negative regulation of Rho protein signal transduction	IEP	HCCA
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	HCCA
CC	GO:0035838	growing cell tip	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
CC	GO:0045177	apical part of cell	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0046580	negative regulation of Ras protein signal transduction	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051058	negative regulation of small GTPase mediated signal transduction	IEP	HCCA
MF	GO:0051219	phosphoprotein binding	IEP	HCCA
CC	GO:0051286	cell tip	IEP	HCCA
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
CC	GO:0060187	cell pole	IEP	HCCA
MF	GO:0060229	lipase activator activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
CC	GO:0070382	exocytic vesicle	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071692	protein localization to extracellular region	IEP	HCCA
BP	GO:0080092	regulation of pollen tube growth	IEP	HCCA
CC	GO:0090404	pollen tube tip	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
BP	GO:0098609	cell-cell adhesion	IEP	HCCA
MF	GO:0098772	molecular function regulator	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099503	secretory vesicle	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000095	CRIB_dom	27	59

External Links

PLAZA 3.0 Dicots	AT1G04450

AT1G04450

Expression Profile

Co-expression Networks

Functional Annotation