1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G42525

AT1G42525


Description : BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G37020.1); Has 49 Blast hits to 32 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG_01_0000945 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G42525

Target Alias Description ECC score Gene Family Method Actions
AT2G07240 No alias cysteine-type peptidases;cysteine-type peptidases 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G31910 No alias Domain of unknown function (DUF1985) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G08430 No alias Ulp1 protease family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G28235 No alias Ulp1 protease family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G28810 No alias Domain of unknown function (DUF1985) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G45570 No alias Ulp1 protease family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G42525