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Description : Pectin lyase-like superfamily protein
Gene families : OG_01_0000396 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000396_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G43100 | |
| Cluster | HCCA: Cluster_266 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G26620 | No alias | Pectin lyase-like superfamily protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT2G40310 | No alias | Pectin lyase-like superfamily protein | 0.08 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G07820 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | ISS | Interproscan |
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004089 | carbonate dehydratase activity | IEP | HCCA |
| MF | GO:0005275 | amine transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005345 | purine nucleobase transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005451 | monovalent cation:proton antiporter activity | IEP | HCCA |
| BP | GO:0006730 | one-carbon metabolic process | IEP | HCCA |
| BP | GO:0006814 | sodium ion transport | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0008643 | carbohydrate transport | IEP | HCCA |
| MF | GO:0009824 | AMP dimethylallyltransferase activity | IEP | HCCA |
| CC | GO:0012505 | endomembrane system | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | HCCA |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | HCCA |
| MF | GO:0015491 | cation:cation antiporter activity | IEP | HCCA |
| BP | GO:0015749 | monosaccharide transmembrane transport | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| MF | GO:0016308 | 1-phosphatidylinositol-4-phosphate 5-kinase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0034219 | carbohydrate transmembrane transport | IEP | HCCA |
| CC | GO:0042995 | cell projection | IEP | HCCA |
| MF | GO:0052622 | ATP dimethylallyltransferase activity | IEP | HCCA |
| MF | GO:0052623 | ADP dimethylallyltransferase activity | IEP | HCCA |
| CC | GO:0090406 | pollen tube | IEP | HCCA |
| CC | GO:0120025 | plasma membrane bounded cell projection | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000743 | Glyco_hydro_28 | 64 | 390 |
| PLAZA 3.0 Dicots | AT1G43100 |