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  5. Cre09.g392350

Cre09.g392350


Description : Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana


Gene families : OG_01_0000078 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g392350
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT1G18630 No alias glycine-rich RNA-binding protein 6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23830 No alias glycine-rich RNA-binding protein 4 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G26420 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_23410V3.1 No alias glycine-rich RNA-binding protein 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_23420V3.1 No alias glycine-rich RNA-binding protein 3 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_4050V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_3360V3.1 No alias cold, circadian rhythm, and RNA binding 1 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 5 74
No external refs found!