Cre09.g394843

No description available

Gene families : OG_01_0004958 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004958_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre09.g394843
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AT1G17210	No alias	IAP-like protein 1	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G48950	No alias	C3HC zinc finger-like	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g04310.1	No alias	no hits & (original description: none)	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012935	Znf_C3HC-like	58	181

External Links

No external refs found!