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  5. Cre09.g411200

Cre09.g411200


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein


Gene families : OG_01_0005780 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g411200
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G71500 No alias Rieske (2Fe-2S) domain-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g07060.1 No alias Psb33 protein involved in PS-II assembly 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_9090V3.1 No alias Rieske (2Fe-2S) domain-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02176.1 No alias protein involved in PS-II assembly (Psb33) 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006576 cellular biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0042401 cellular biogenic amine biosynthetic process IEP HCCA
BP GO:0044106 cellular amine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012748 Rieske-like_NirD 74 188
No external refs found!