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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL30 component
Gene families : OG_01_0001717 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001717_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre10.g420750 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G77940 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.16 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G18740 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.32 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g01690.1 | No alias | component RPL30 of LSU proteome component | 0.49 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c12_9290V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.29 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c16_10400V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.29 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c25_9320V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.13 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c4_15480V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.33 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c5_4330V3.1 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.39 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| CC | GO:0005747 | mitochondrial respiratory chain complex I | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| CC | GO:0030964 | NADH dehydrogenase complex | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | cellular amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044267 | cellular protein metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:0045271 | respiratory chain complex I | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1902495 | transmembrane transporter complex | IEP | HCCA |
| CC | GO:1990351 | transporter complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 14 | 106 |
| No external refs found! |