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  5. Cre10.g425675

Cre10.g425675


No description available


Gene families : OG_01_0005846 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g425675
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT3G14120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g23360.1 No alias NUP107 scaffold nucleoporin of nuclear pore complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_15880V3.1 No alias No annotation 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007252 Nup84/Nup107 77 349
No external refs found!