Cre10.g435450

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor

Gene families : OG_01_0000333 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000333_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre10.g435450
Cluster	HCCA: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G08000	No alias	GATA transcription factor 10	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006352	DNA-templated transcription, initiation	IEP	HCCA
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	380	414

External Links

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Cre10.g435450

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation