AT1G48060

Description : F-box and associated interaction domains-containing protein

Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48060
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AT1G46912	No alias	F-box associated ubiquitination effector family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47350	No alias	F-box associated ubiquitination effector family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47730	No alias	F-box and associated interaction domains-containing protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55947	No alias	No description available	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13630	No alias	F-box associated ubiquitination effector family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49450	No alias	F-box and associated interaction domains-containing protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G38870	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52610	No alias	F-box and associated interaction domains-containing protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62660	No alias	F-box and associated interaction domains-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013187	F-box-assoc_dom_typ3	232	301
IPR001810	F-box_dom	12	50

External Links

PLAZA 3.0 Dicots	AT1G48060