Cre11.g481700

No description available

Gene families : OG_01_0008769 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008769_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre11.g481700
Cluster	HCCA: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G55100	No alias	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003909	DNA ligase activity	IEP	HCCA
MF	GO:0003910	DNA ligase (ATP) activity	IEP	HCCA
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006811	ion transport	IEP	HCCA
BP	GO:0006817	phosphate ion transport	IEP	HCCA
BP	GO:0006820	anion transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019147	SWAP_N_domain	33	114
IPR000061	Surp	631	681
IPR000061	Surp	356	401

External Links

No external refs found!