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  5. AT1G48820

AT1G48820


Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein


Gene families : OG_01_0000165 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G48820
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G61680 No alias terpene synthase 14 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G24210 No alias terpene synthase 10 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G14520 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 156 224
IPR001906 Terpene_synth_N 73 154
IPR005630 Terpene_synthase_metal-bd 255 505
PLAZA 3.0 Dicots AT1G48820