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  5. Cre12.g498600

Cre12.g498600


Description : Elongation factor 1-alpha OS=Glycine max


Gene families : OG_01_0000158 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g498600
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_23850V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_23920V3.1 No alias GTP binding Elongation factor Tu family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_6650V3.1 No alias GTP binding Elongation factor Tu family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_6770V3.1 No alias GTP binding Elongation factor Tu family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 312 384
IPR000795 T_Tr_GTP-bd_dom 44 283
IPR004160 Transl_elong_EFTu/EF1A_C 393 499
No external refs found!