AT1G48940

Description : early nodulin-like protein 6

Gene families : OG_01_0000560 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48940
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
AT1G79800	No alias	early nodulin-like protein 7	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G23990	No alias	early nodulin-like protein 11	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G30590	No alias	early nodulin-like protein 12	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0016020	membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	TAS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003245	Phytocyanin_dom	41	119

External Links

PLAZA 3.0 Dicots	AT1G48940