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  5. Cre12.g506450

Cre12.g506450


Description : Chromatin organisation.histones.H4-type histone


Gene families : OG_01_0000034 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g506450
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G07820 No alias Histone superfamily protein 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28740 No alias histone H4 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45930 No alias Histone superfamily protein 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46320 No alias Histone superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G53730 No alias Histone superfamily protein 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59690 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59970 No alias Histone superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g649950 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g650250 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708200 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714600 No alias Chromatin organisation.histones.H4-type histone 0.5 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g03090.1 No alias histone (H4) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g13440.1 No alias histone (H4) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g16840.1 No alias histone (H4) 0.6 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22460.1 No alias histone (H4) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g22470.1 No alias histone (H4) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_5310V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_22340V3.1 No alias histone H4 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_22160V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_22150V3.1 No alias histone H4 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11992.1 No alias histone (H4) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11997.1 No alias histone (H4) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 34 96
No external refs found!