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  5. AT1G49210

AT1G49210


Description : RING/U-box superfamily protein


Gene families : OG_01_0000404 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49210
Cluster HCCA: Cluster_201


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0016567 protein ubiquitination IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0010487 thermospermine synthase activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0016768 spermine synthase activity IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048759 xylem vessel member cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1905177 tracheary element differentiation IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 134 177
PLAZA 3.0 Dicots AT1G49210