Cre12.g516100

No description available

Gene families : OG_01_0003296 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003296_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g516100
Cluster	HCCA: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G01230	No alias	ORMDL family protein	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_7910V3.1	No alias	ORMDL family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005789	endoplasmic reticulum membrane	IEA	Interproscan
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEP	HCCA
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	HCCA
CC	GO:0036452	ESCRT complex	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071985	multivesicular body sorting pathway	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007203	ORMDL	13	146

External Links

No external refs found!