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  5. Cre12.g544700

Cre12.g544700


Description : Pumilio homolog 12 OS=Arabidopsis thaliana


Gene families : OG_01_0002597 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g544700
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Zci_11571.1 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11571.3 No alias no annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 617 649
IPR001313 Pumilio_RNA-bd_rpt 692 711
IPR001313 Pumilio_RNA-bd_rpt 657 684
IPR001313 Pumilio_RNA-bd_rpt 581 609
IPR001313 Pumilio_RNA-bd_rpt 542 571
No external refs found!