1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G50060

AT1G50060


Description : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein


Gene families : OG_01_0000025 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G50060
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278158 No alias No description available 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre11.g467672 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g11950.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_120V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048829 root cap development IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 31 149
PLAZA 3.0 Dicots AT1G50060