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  5. Cre12.g549550

Cre12.g549550


Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.beta-Tubulin component


Gene families : OG_01_0000197 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g549550
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT5G44340 No alias tubulin beta chain 4 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62690 No alias tubulin beta chain 2 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62700 No alias tubulin beta chain 3 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_20340V3.1 No alias tubulin beta chain 2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_2420V3.1 No alias tubulin beta chain 2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_14439.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
CC GO:0005929 cilium IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0031514 motile cilium IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0040011 locomotion IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0048870 cell motility IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!