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Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein
Gene families : OG_01_0005401 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre13.g562850 | |
| Cluster | HCCA: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G20890 | No alias | photosystem II reaction center PSB29 protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp5g23000.1 | No alias | Psb29 protein involved in PS-II assembly | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c21_14540V3.1 | No alias | photosystem II reaction center PSB29 protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_14760.1 | No alias | regulatory protein (THF1) of thylakoid biogenesis | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0010207 | photosystem II assembly | IEA | Interproscan |
| BP | GO:0015979 | photosynthesis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006595 | polyamine metabolic process | IEP | HCCA |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | HCCA |
| BP | GO:0006597 | spermine biosynthetic process | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008215 | spermine metabolic process | IEP | HCCA |
| BP | GO:0008216 | spermidine metabolic process | IEP | HCCA |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | HCCA |
| BP | GO:0044106 | cellular amine metabolic process | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017499 | Thf1 | 44 | 246 |
| No external refs found! |